mvpa.misc.io.base.SensorLocations

Class SensorLocations

Base class for sensor location readers.

Each subclass should provide x, y, z coordinates via the pos_x, pos_y, and pos_z attrbibutes.

Axes should follow the following convention:

x-axis: left -> right y-axis: anterior -> posterior z-axis: superior -> inferior

Instance Methods

new empty dictionary

__init__(self, *args, **kwargs)
Pass arguments to ColumnData.

source code

locations(self)
Get the sensor locations as an array.

source code

Inherited from ColumnData: __iadd__, __str__, getNColumns, getNRows, selectSamples, tofile

Inherited from ColumnData (private): _check, _fromFile, _getAttrib

Inherited from dict: __cmp__, __contains__, __delitem__, __eq__, __ge__, __getattribute__, __getitem__, __gt__, __iter__, __le__, __len__, __lt__, __ne__, __new__, __repr__, __setitem__, __sizeof__, clear, copy, fromkeys, get, has_key, items, iteritems, iterkeys, itervalues, keys, pop, popitem, setdefault, update, values, viewitems, viewkeys, viewvalues

Inherited from object: __delattr__, __format__, __reduce__, __reduce_ex__, __setattr__, __subclasshook__

Class Variables

[hide private]

Inherited from ColumnData: __doc__, ncolumns, nrows

Inherited from dict: __hash__

Properties

[hide private]

Inherited from object: __class__

init(self, *args, **kwargs)
(Constructor)

source code

Pass arguments to ColumnData.

Parameters:

source - If values is given as a string all data is read from the file and additonal keyword arguments can be sued to customize the read procedure. If a dictionary is passed a deepcopy is performed.
header - Indicates whether the column names should be read from the first line (header=True). If header=False unique column names will be generated (see class docs). If header is a python list, it's content is used as column header names and its length has to match the number of columns in the file.
sep - Separator string. The actual meaning depends on the output format (see class docs).
headersep - Separator string used in the header. The actual meaning depends on the output format (see class docs).
dtype - Desired datatype(s). Datatype per column get be specified by passing a list of types.
skiplines - Number of lines to skip at the beginning of the file.

Returns: new empty dictionary

Overrides: object.__init__

locations(self)

source code

Get the sensor locations as an array.

Returns:: (nchannels x 3) array with coordinates in (x, y, z)

Class SensorLocations

__init__(self, *args, **kwargs) (Constructor)

locations(self)

init(self, *args, **kwargs)
(Constructor)